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  "Title": "Hybrid Genetic Algorithm and Simulated Annealing for Variable\nSelection with Interaction Effects",
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  "Description": "A hybrid genetic algorithm combined with simulated\nannealing for variable selection in high-dimensional linear\nregression with two-way interaction effects. The package uses\nan indexed model formulation for efficient storage and\nminimizes the ABC (Adaptive Best-subset with Complexity)\ncriterion from Ye and Yang (2019)\n<doi:10.1109/TIT.2019.2913417>. Features include: (1) support\nfor all three heredity conditions (strong, weak, and no\nheredity), (2) adaptive temperature control in simulated\nannealing, (3) LASSO-based screening for ultra-high-dimensional\nproblems, and (4) automatic sigma and lambda tuning. The\npackage scales to problems with thousands of predictors.",
  "License": "GPL-2",
  "Encoding": "UTF-8",
  "Language": "en-US",
  "Author": "Leiyue Li [aut, cre], Zhengzhong You [aut], Zeya Wang [aut],\nChenglong Ye [aut]",
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